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《Journal of Anhui Agricultural Sciences》 2009-10
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Establishemnt of SSR Fingerprint Map and Analysis of Genetic Similarity among 42 Parents of Japonica Hybrid Rice

LIU Hai-zhen et al(Agricultural College,Anhui Agricultural University,Hefei,Anhui 230036)  
[Objective] The study aims to research SSR method establishing the SSR fingerprinting map of parents of japonica hybrid rice.[Method] The genomic DNA of 42 parents of japonica hybird rice is used for PCR analysis with 48 pairs of SSR primers,of which 12 primers are selected as core primers because of their stable polymorphism.A database of SSR fingerprint for 42 genotypes at the 12 primer loci is constructed.[Result] The genetic similarity of 42 genotypes is calculated by cluster analysis of an un-weighted pair-group average method with arithmetic mean,the result shows that 42 varieties of rice can be classified into 5 groups at the level of genetic similarity coefficient is 0.73.[Conclusion]The result of cluster basically reflects the genetic relationships among varieties.
【Fund】: 国家科技支撑计划(2006BAD13B01)
【CateGory Index】: S511.22
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【References】
Chinese Journal Full-text Database 3 Hits
1 NIU Fu-an;CHENG Can;ZHOU Ji-hua;YUAN Qin;CHU Huang-wei;CAO Li-ming;LUO Zhong-yong;Shanghai Academy of Agricultural Sciences;Shanghai Agricultural Seed and Seedling Co. Ltd;;Application Status and Prospect of Molecular Marker in Japonica Hybrid Rice Breeding[J];China Rice;2015-01
2 WANG Chang-hua1,WU Tian-hua2,ZHANG Yan-zhi1,XU Zheng-jin2,ZHENG Wen-jing1,ZHAO Jia-ming1,WANG Hui1(1.Rice Research Institute,Liaoning Academy of Agricultural Sciences,Liaoning Shenyang 110161,China;2.Rice Research Institute,Shenyang Agricultural University,Liaoning Shenyang 110161,China);Analysis of Relativity between Main Quality Traits,Combining Ability and Heterosis of Hybrid Rice in North China[J];Southwest China Journal of Agricultural Sciences;2011-02
3 TANG Hao;YU Han-yong;ZHANG Xin-ming;WEI Xing-hua;Development Center of Science and Technology of Ministry of Agriculture;China National Rice Research Institute;;Analysis on the Diversity of DNA Fingerprinting of the Example Varieties Used for the Test of Rice New Varieties[J];Journal of Plant Genetic Resources;2015-01
【Citations】
Chinese Journal Full-text Database 10 Hits
1 Wang Aishun1 Li Jinbo2 Liu Hanzhen1 1 Hubei Provincial Seed Management Station, Wuhan, 430070; 2 Hybrid Rice Researc h and Development Center, Hubei Academy of Agricultural Sciences, Wuhan, 430064;Research Advance on Application of DNA Fingerprinting to Identification Seed Purity and Authenticity in Hybrid Rice[J];Molecular Plant Breeding;2005-03
2 ZHANG Yan,GUO Shi-wei,HE Bing,GAO Dong-ying(Institute of Agribiological Genetics and Physiology,Jiangsu Academy of Agricultural Sciences,Nanjing210014,China);Construction of Molecular Fingerprinting Database for Hybrid Rice Using SSR Markers[J];Jiangsu Journal of Agricultural Sciences;2006-02
3 SHI Kuan-yu,HONG De-lin~*(National Key Laboratory of Crop Genetics and Germplasm Enhancement,Nanjing Agricultural University,Nanjing 210095,China);Polymorphism of 6 hybrids and their parents amplified by SSR primers and its application in rice(Oryza sativa L.)[J];Journal of Nanjing Agricultural University;2005-04
4 CHENG Bao-shan1,WAN Zhi-bing1,2,HONG De-lin1*(1.State Key Laboratory of Crop Genetics and Germplasm Enhancement,Nanjing Agricultural University,Nanjing 210095,China;2.Department of Resource and Environment,Huangshan University,Huangshan 245041,China);Establishment of SSR fingerprint map and analysis of genetic similarity among 35 varieties in japonica rice(Oryza sativa L.)[J];Journal of Nanjing Agricultural University;2007-03
5 Zhu Zuofeng Sun Chuanqing Li Zichao Wang Xiangkun Dept. Of Genetics & Breeding, China Agricultural University, Beijing 100094;Study on the Classification of Rice Varieties with SSR Molecular Markers[J];Journal of Agricultural Biotechnology;2001-01
6 Li Jing Zhao 1,2 He Ping 1 LI Shi Gui 3 LU Run Long 2 ZHU Li Huang 1* 1(Institute of Genetics,The Chinese Academy of Sciences,Beijing 100101) 2(Department of Biology,The Chinese University of Sciences and Technology,Hef;Application of Microsatellite Markers for the Seed Purity Examination of a Hybrid Rice,Gangyou 22[J];CHINESE JOURNAL OF BIOTECHNOLOGY;2000-02
7 YU Yong hong 1, LI Yun hai 1, MA Rong rong 2, WANG Xiao yan 3, HU Guo cheng 1, SI Hua min 1, FU Ya ping 1, SUN Zong xiu 1 ( 1Key Laboratory for Rice Biology,Ministry of Agriculture,P.R.China,China National Rice Research Institure,Hangzho;Establishment of Fingerprint Map of Ning 2A with Simple Sequence Repeat Markers[J];Chinese Journal of Rice Science;2001-03
8 PENG Suo tang 1, ZHUANG Jie yun 2, YAN Qi chuan 1, ZHENG Kang le 2( 1 College of Agricultural and Biotechnology, Zhejiang University, Hangzhou 310029, China; 2Chinese National Center for Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China; 3Zhejiang Senhe Seed Co., Ltd, Hangzhou 310021, China);SSR Markers Selection and Purity Detection of Major Hybrid Rice Combinations and Their Parents in China[J];Chinese Journal of Rice Science;2003-01
9 SHI Yong-feng~1, YING Jie-zheng~2, WANG Lei~3, ZHU Zhi-wei~1, ZHUANG Jie-yun~(2,*) (1Rice Product Quality Inspection and Supervision Center, Ministry of Agriculture, P. R. China, China National Rice Research Institute, Hangzhou 310006, China; 2 Chinese National Center for Rice Improvement/State Key Laboratory of Rice Science, China National Rice Research Institute, Hangzhou 310006, China; 3 Information Service Center, China National Rice Research Institute, Hangzhou 310006, China;);Screening SSR Markers for Rice Variety Identification[J];Chinese Journal of Rice Science;2005-03
10 XIAO Xiao-yu~ 1,2,3,# , WANG Yu-ping~ 1,2,# , ZHANG Jian-yong~ 1,2 , LI Shi-gui~ 1,2,* , RONG Ting-zhao~ 1,2,* (~1Rice Research Institute, Sichuan Agricultural University, Wenjiang 611130, China; ~2Key Laboratory of Crop Genetic Resources and Improvement, Ministry of Education, Sichuan Agricultural University, Ya′an 625014, China; ~3Seed Management Station of Sichuan Province, Chengdu 610041, China; ~#These authors contyribute equally in this paper; ~ * Corresponding author, E-mail:lishigui_sc@263.net);SSR Marker-based Genetic Diversity Fingerprinting of Hybrid Rice in Sichuan,China[J];Chinese Journal of Rice Science;2006-01
【Co-citations】
Chinese Journal Full-text Database 10 Hits
1 LI Ru-yu,LI Qun,ZHANG Wen-lan,ZHANG Han,SONG Guo-an,WANG Dong-jian(Crop Research Institute,Shandong Academy of Agricultural Sciences,Jinan 250100,China);Application of SSR Markers to Identification and Protection of Wheat Variety[J];Shandong Agricultural Sciences;2007-06
2 Huo Yuyan et al. (School of Life Sciences,Yangtze University,Jingzhou 434025,China);Research Overview on Application of SSR Markers in Rice[J];Anhui Agricultural Science Bulletin;2010-23
3 Cai Jian et al (Key Laboratory of Rice Genetics and Breeding of MOA, Hefei 230031);Study Progress of the Relationship between Heterosis and Genetic Differentiation of Crossing Parents in Crop[J];Journal of Anhui Agricultural Sciences;2002-04
4 JU Yu-dong et al (Sugarcane Research Institute,Fujian Academy of Agricultural Science, Zhangzhou, Fujian 363005);Development and Application of Micro-satellite Markers in Rice[J];Journal of Anhui Agricultural Sciences;2005-10
5 LIU Guan-ming et al (Agriculture and Garden College,Zhongkai Agrotechnical University,Guangzhou,Guangdong 510225);SSR Analysis of Genetic Diversity of Shanyou and Yueyou Peanut Cultivars[J];Journal of Anhui Agricultural Sciences;2006-11
6 NIE Qiong et al (College of Agronomy,Guizhou University,Guiyang,Guizhou 550025);SSR and Salt-soluble Protein PAGE in Maize Seed Purity Test[J];Journal of Anhui Agricultural Sciences;2006-22
7 AO Guang-hui et al(Neijiang Normal University,Neijiang,Sichuan 641112);Analysis on the Molecular Marker Difference among Indica and Japonica Rice Subspecies[J];Journal of Anhui Agricultural Sciences;2008-05
8 HUANG Cheng-zhi et al(Three Gorges Academy of Agricultural Sciences in Chongqing,Chongqing 404001);Identification of True or False and Purity of Hybrid Rice with SSR Molecular Marker[J];Journal of Anhui Agricultural Sciences;2009-08
9 ZHU Shi-yang et al(Department of Agriculture and Biotechnology,Wenzhou Vocational College of Science and Technology;Zhenan Key Laboratory of Crop Breeding,Wenzhou,Zhejiang 325006);Research on the Optimization of SSR-PCR System in Rice[J];Journal of Anhui Agricultural Sciences;2009-08
10 QI Chang-sheng(Jiangyou Agriculture Bureau of Sichuan Province,Jiangyou,Sichuan 621700);Progress in Early Identification to Seed Purity of Liang youpeijiu[J];Journal of Anhui Agricultural Sciences;2009-16
China Proceedings of conference Full-text Database 3 Hits
1 QI Yong-wen ZHANG Hong-liang ZHANG Dong-ling WANG Mei-xing SUN Jun-li WANG Xiang-kun LI Zi-chao Key Laboratory of Crop Genomics and Genetic Improvemen of Ministry of Agriculture and Beijing Key Laboratory of Crop Genetic Improvement,China Agricultural University,Beijing 100094 WEI Xing-hua Tang Sheng-xiang Chinese Rice Research Institute,Hongzhou,310006; QIU Zong-en CAO Yong-sheng Institute of crop science,Chinese Academy of Agricultural Science,Beijing,100081;Genetic diversity of rice cultivars in China assessed by microsatellite and phenotypic traits[A];[C];2005
2 Lei Kairong Chongqing Academy of Agricultural Sciences, Chongqing Engineering Research Center for Crop Biotechnology, Chongqing, 400055;Application of Molecular Marker Technology in Crop Germplasm Evaluation[A];[C];2006
3 YANG Yang, LIU Zhen, ZHAO Yang, YANG Pei-di (Tea Research Institute, Hunan Academy of Agriculture Science, Changsha, 410125, China);Construction of DNA Fingerprint for Tea Cultivars Originated from Hunan[A];[C];2009
【Co-references】
Chinese Journal Full-text Database 10 Hits
1 AI Cheng-xiang,LIU Qing-Zhong,LI Guo-tian,ZHANG Li-si(Shandong Institute of Pomology,Taian 271000,China);Establishment of Fingerprint for Sweet Cherry Cultivars Using SSR Markers[J];Shandong Agricultural Sciences;2010-04
2 WU Wen-ge1,ZHANG Yu-hai1,2,ZHANG Jian-mei3,XU You-zun1,HE Chao-bo3,LI Xia-hong4, XU Chang-bin4,LI Fu-jun4,CHEN Xue-ying4 (1.Institute of Rice Science, Anhui Agriculture Academy, Hefei 230031;2.School of Agronomy, Anhui Agricultural University, Hefei 230006;3.Anhui Agricultural Machinery Technology Extension Station, Hefei 230061;4.Agricultural Technology Service Station of Tianchang city of Anhui Province,Tianchang 239300);Effects of nitrogen management on mass quality and yield formation of machine transplanted middle-season Indica hybrid rice[J];Journal of Anhui Agricultural University;2011-01
3 CHEN Wei. General Station of Forest Resource Administration of Fujian Province,Fuzhou,350003,P. R. China.;Genetic diversity of the natural populations of Betula luminifera.[J];Journal of Beijing Forestry University;2006-06
4 ZHANG Xue ning 1,GUO Bao lin 1,ZHANG Kai chun 2(1 College of Forestry Resources and Engineering, Agricultural University of Hebei, Baoding 071001, China; 2 Institute of Forestry and Pomology, Beijing Academy of Agricultural and Forestry Science, Beijing 100093,China);Research advances on molecular markers in fruit trees[J];Journal of Agricultural University of Hebei;2003-S1
5 DUAN Hui-jun,MA Zhi-ying,ZHANG Cai-ying,GUO Xiao-min,LI Xi-huan,WEN Xiao-jie(College of Agronomy,Agricultural University of Hebei,Baoding 071001,China);AFLP analysis on sibship of watermelon cultivars[J];Journal of Agricultural University of Hebei;2007-01
6 TAN Yue-ping2,LI Juan1,LIU Shuo-qian1,YAN Chang-yu3,CHEN Jin-hua (1. Key Lab of Tea Science of Ministry of Education,Hunan Agricultural University,Changsha 410128,China; 2. Hunan Tea Company,Ltd.,Changsha 410002,China; 3. Tea Research Institute,Guangdong Academy of Agricultural Sciences,Guangzhou 510640,China);Genetic Diversity of 43 Tea Cultivars (Camellia sinensis(L.) O. Kuntze) by SSR Markers[J];Journal of Tea Science;2009-04
7 Wang Yan-rong1, Cui Ye-han2, Nan Zhi-biao1, Wang Yun-wen1(1.Gansu Grassland Ecological Research Institute, P.O. Box 61, Lanzhou 730020, China;2. Plant Variety Protection Office, Ministry of Agriculture, Bejing 100026, China);Characteristic selection and example variety determination of DUS testing guidelines of plant new variety[J];Pratacultural Science;2002-02
8 Jin Zhengxun, Cui Chenghuan, Qiu Taiquan (Northeast Agricultural University,Harbin 150030,PRC);ANALYSIS OF THE COMBINING ABILITY OF AMYLOSECONTENT IN GRAINS OF RICE HYBRID[J];JOURNAL OF NORTHEAST AGRICULTURAL UNIVERSITY;1999-02
9 Yang Chuanping, Wang Yanmin, Wei Zhigang(the Provincial Key Lab of Forest Genetics and Breeding, Northeast Forestry University, Harbin 150040, P. R. China);Optimization of SSR-PCR System for Betula platyphylla Using Orthogonal Design[J];Journal of Northeast Forestry University;2006-06
10 Wan Aihua,Xu Youming(College of Horticulture and Forestry,Huazhong Agricultural University,Wuhan 430070,P.R.China);Guan Lanhua,Ouyang Shaoxiang,Wang Jiangya(China-Japan Corporation Science and Technology Center for Forest Tree Improvement);Genetic Structure of Clonal Seed Orchard of Masson Pine by RAPD Technology[J];Journal of Northeast Forestry University;2008-01
【Secondary References】
Chinese Journal Full-text Database 4 Hits
1 LU Xingna;MA Kun;YANG Guotao;ZHANG Ling;HU Yungao;College of Life Science and Engineering,Southwest University of Science and Technology;;Combining Ability of Production and Dry Matter Accumulation and Transshipment in Six Hybrid Rice Parents[J];Guizhou Agricultural Sciences;2014-02
2 ZHENG Yi;YANG De-wei;TU Shi-hang;LIN Qiang;YOU Qing-ru;ZHOU Peng;WANG Hong-fei;HUANG Ting-xu;LINAG Kang-jing;Rice Research Institute,Fujian Academy of Agricultural Sciences;Key Laboratory of Ministry of Education for Genetics,Breeding and Multiple Utilization of Crops,Fujian Agriculture and Forestry University;;Research Progress on Combining Ability and Heritability of Hybrid Rice(Oryza sativa.L)[J];Fujian Journal of Agricultural Sciences;2014-09
3 GUO Lianan;HU Yungao;YANG Guotao;YI Jun;YAN Shengmin;Rice Research Institute,Southwest University of Science and Technology;;Combining Ability and Heritability of Sterile Lines with Different Cytoplasm and Restorers in Rice[J];Guizhou Agricultural Sciences;2014-10
4 CHEN Xiao-long1,3,WU Jun2,3,DENG Qi-yun1,2,3,ZHUANG Wen2,3,CHANG Shuo-qi3,WU Dan1(1.Hunan Agricultural University,Changsha 410128,PRC;2.Hunan Hybrid Rice Research Center,Changsha 410125,PRC;3.State Key Laboratory of Hybrid Rice,Changsha 410125,PRC);Advances in Combining Ability of Super Hybrid Rice[J];Hunan Agricultural Sciences;2013-03
【Secondary Citations】
Chinese Journal Full-text Database 10 Hits
1 Yang Shulan 1 Fu Jianming 2 Yang Rencui 1 Wang Bin 2 ( 1 College of Crop Sciences, FAU, Fuzhou 350002; 2 Institute of Genetics, Academia Sinica, Beijing 100101);The purity identification of two line hybrids based on Peiai 64s with RAPD marker[J];JOURNAL OF FUJIAN AGRICULTURAL UNIVERSITY(NATURAL SCIENCE);1998-01
2 Li Jinbo 2,3 Jiang Liangrong 3 Li Chunhai 1 Mou tongmin 1* 1 National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070 2 Hybrid Rice Research and Development Center, Hubei Academy of Agricultural Sciences, Wuhan, 430070 3 Hainan Provincial Key Laboratory of Crop Molecular Breeding, Sanya, 572025;Comparisons of Genetic Analysis Based on ISSR and SSR in PGMS and TGMS Rice Lines[J];Molecular Plant Breeding;2003-01
3 Zheng Jingsheng 1,2 Lü Bei 1 1 Hainan Provincial Key Laboratory of Crop Molecular Breeding,Sanya,572025 2 The Institute of Rice&wheat,Fujian Academy of Agricaltural Sciences,Fuzhou,350019;PCR Technique and its Practical Methods[J];Molecular Plant Breeding;2003-03
4 Li Jinbo Yang Guocai Fei Zhenjiang Qi Huaxiong *Hybrid Rice Research and Development Center, Hubei Academy of Agricultural Sciences, Wuhan, 430064;Analysis of DNA Fingerprints on Different Types of Biological Contamination of Other Pollens in Liangyou932[J];Molecular Plant Breeding;2005-02
5 Wang Aishun1 Li Jinbo2 Liu Hanzhen1 1 Hubei Provincial Seed Management Station, Wuhan, 430070; 2 Hybrid Rice Researc h and Development Center, Hubei Academy of Agricultural Sciences, Wuhan, 430064;Research Advance on Application of DNA Fingerprinting to Identification Seed Purity and Authenticity in Hybrid Rice[J];Molecular Plant Breeding;2005-03
6 (received Aug. 22, 1997)Fang Xuanjun; Kong Wei; Jin Wu inn(Biotechnology Research Center, Chinese Academy of Agricultural Sciences, Beijing 100080);Rapid One Step DNA Extraction for RAPD-PCR Amplification[J];HIGH TECHNOLOGY LETTERS;1997-10
7 Yin QiumiaoWang DeyuanLi NaijianDeng Yicai(Institute of Vegetable Crops, Guangdong Academy of Agricultural Sciences, Guangzhou 510640);Experimental Design and Statistical Evaluation of DNA Molecular Marker Test Method for Vegetable Seed Purity Detection[J];JOURNAL OF HUBEI AGRICULTURAL COLLEGE;1999-02
8 Qi Huaxiong et al. (Hybrid Rice Eng.Tech.Research Center,Hubei Acad. of Agric. Sci.,Wuhan 430064,China);Identification of hybrid rice seed using PCR techniques[J];HUBEI AGRICULTURAL SCIENCES;1999-01
9 LI Jin-bo 1, ZHOU Yuan-fei 2,WAN Bin-liang 1,QI Hua-xiong 1 (1.Hybrid Rice Research and Development Center, Hubei Academy of Agricultural Sciences, Wuhan 430064,China; 2.Huanzhong Agricultural University,Wuhan 430070,China);Identification of the true and false seeds of two-line hybrid Keng rice combination E-geng-za No.1 using SSR markers[J];Hubei Agricultural Sciences;2003-01
10 ZHANG Yan,GUO Shi-wei,HE Bing,GAO Dong-ying(Institute of Agribiological Genetics and Physiology,Jiangsu Academy of Agricultural Sciences,Nanjing210014,China);Construction of Molecular Fingerprinting Database for Hybrid Rice Using SSR Markers[J];Jiangsu Journal of Agricultural Sciences;2006-02
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