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《Journal of Beijing Jiaotong University》 2009-06
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Analysis of Similarity Between DNA Sequence Sets Based on Laplace Matrix

QIN Yang,WANG Lihong,WU Shuanhu,SONG Yibin(School of Computer,Yantai University,Yantai Shandong 264005,China)  
Similarity measure between two sequence sets are studied,and the concept,as well as the expression of a new divergence is proposed.Experiments on synthetic data and real DNA sequence sets show that this divergence can measure the similarity between sequence sets.
【Fund】: 国家自然科学基金资助项目(60772028);; 山东省自然科学基金资助项目(Y2008G08 Y2006G22)
【CateGory Index】: Q75
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【Citations】
Chinese Journal Full-text Database 1 Hits
1 YU Li, LIU Lu (School of Economics & Management,Beijing University of Aeronautics & Astronautics,Beijing 100083);Research on the Similarity of Events Sequences[J];Computer Engineering;2003-15
【Co-citations】
Chinese Journal Full-text Database 10 Hits
1 WANG Yong et al (School of Food and Biological Engineering, Jiangsu University, Zhenjiang,Jiangsu 212013);Introduction to Usage of Phylogenetic Analysis Softwares PAUP and TreePuzzle[J];Journal of Anhui Agricultural Sciences;2008-02
2 Zhang Huanping1 Wang Huinan1 Lu Guangming2 Zhong Yuan1 Zhang Zhiqiang2(1Department of Biomedical Engineering,Nanjing University of Aeronautics and Astronautics,Nanjing210016,China)(2Department of Medical Imaging,Nanjing General Hospital of Nanjing Military Command,Nanjing 210002,China);Finding differentially co-expressed disease-related genes based on mutual information[J];Journal of Southeast University(Natural Science Edition);2009-01
3 GUO Zhi-long1,2,JI Zhao-hua1,3,TU Hua-wei1,LIANG Yan-chun1(1.College of Computer Science and Technology,Jilin University,Changchun 130012,China;2.Dalian Huaxin Software Corporation,DaLian 116000,China;3.Inner Mongolia Xing'an Vocational and Technical College,Wulanhaote 137400,China);The Research Content And Data Analysis Methods on the Gene Regulatory Networks[J];Computer Knowledge and Technology;2008-15
4 Shi Ouyan~(* **) Yang Huiyun~* Yang Jing~(**) Tian Xin~* (~*Department of Biomedical Engineering,Tianjin Medical University,Tianjin 300070)(~(**)Faculty of Basic Medicine,Tianjin Medical University,Tianjin 300070);Optimal hidden Markov models for protein secondary structure prediction[J];Chinese High Technology Letters;2008-07
5 WANG Yong et al(School of Food and Biological Engineering,Jiangsu University,Zhenjiang,Jiangsu 212013);An Introduction to the Operation Method of Phylogenetic Analysis Program MrBayes 3.1[J];Journal of Anhui Agricultural Sciences;2009-33
6 WANG Wenwen,WU Shuanhu(School of Computer,Yantai University,Yantai Shangdong 264005,China);Algorithm for Promoter Prediction Based on Double-Stranded Characteristics of DNA[J];Journal of Beijing Jiaotong University;2009-06
7 Zhang Shouxia,Gao Lin(School of Computer Science and Technology,Xidian University,Xi'an 710071,China);Algorithm for Motif Discovery Based on Position Dependency[J];Electronic Science and Technology;2010-01
8 XIANG Tai-he(School of Life and Environmental Sciences,Hangzhou Teachers College,Hangzhou 310036,China);Analysis on Content of Bioinformatics Textbooks and Internet Sources in China[J];Journal of Hangzhou Teachers College(Natural Sciences Edition);2006-06
9 Yan Leiming Sun Zhihui(Department of Computer Science and Engineering,Southeast University,Nanjing 210096);A Biclustering Algorithm Based on Quadratic Mutual Information[J];Computer Engineering and Applications;2006-22
10 LI Wei,ZHAO Ya-ou,CHEN Yue-hui Department of Information Science and Engineering,University of Jinan,Jinan 250022,China;Predicting protein secondary structure by balancing data method[J];Computer Engineering and Applications;2009-06
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