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《Chinese Journal of Zoology》 2004-05
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The Molecular Taxonomy and Phylogeny of Zebrafish(Danio rerio) Based on the Cyt-b Partial Sequences

XIANG Fang~① ZOU Ji-Xing~② DENG Feng-Jiao~① LIU Si-Yang~① SUI Yang~①(① Key Laboratory of MOE for Developmental Biology, College of Life Science, Wuhan University, Wuhan 430072; ②Institute of Nanhai Ocean, Chinese Academy of Science, Guangzhou 510301,China)  
The taxonomy and phylogenic relationships of zebrafish were investigated by the cyt-b gene partial DNA sequence analysis of mitochondria. 426?bp of cyt-b from Danio rerio(long fin), D.rerio(short fin), D.rerio frankei, Gambusia affinis and Epinephelus awoara, respectively, were cloned and sequenced. Combined with the homologous sequences of Megalobrama amblycephala, Oryzias latipes, Ctenopharyngodon idella and Etroplus maculatus from Genebank, the aligment shows that the mean base composition for partial cyt-b is 26.7% adenine, 26.1% cytosine, 16.6% guanine, and 30.5% thymine and that the third position of the codon have a base bias (G% is only 6.4%). The sequence similarity of D.rerio(long fin), D.rerio(short fin) and D.rerio frankei is above 99%. Phylogenetic trees were constructed with Neighbor Joining method. Those results collectively indicated that D.rerio frankei might be clustered with D.rerio(long fin) first, then with D.rerio(short fin). The results support the opinion of Frankel and David that D.rerio frankei belongs to a subspecies of D.rerio and is not an individual species.
【Fund】: 国家自然科学基金资助项目 (No.30 370 74 4 ;;30 15 0 0 0 5 )
【CateGory Index】: Q959
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