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《Acta Sericologica Sinica》 2005-04
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Comparison of ESTs and SNPs From Posterior Silkgland of Silkworm Bombyx mori Between the Strain P50 and C108

YU Dongliang~(1,2) ZHONG Boxiong~(1*) FU Yan~1 WANG Xusheng~3 (~1College of Animal Science,Zhejiang University,Hangzhou 310029,China;~2James D.Watson Institute of Genome Sciences,Zhejiang University,Hangzhou 310029,China;~3College of Agriculture and Biotechnology,Zhejiang University,Hangzhou 310029,China)  
The expressing sequence tags(ESTs) from the fourth molters and fifth instar silkworm larvae of strain P50 and C108 were analyzed with the BLAST sofeware.The results confirmed in the molecular level that the protein synthesis is more active in the fifth-instar than that in the fourth molting.Totally(1 584) candidate single nucleotide polymorphisms(SNPs) were identified with Sim4 and Diffseq tools from the ESTs,of which there were 820 times of transvertions(51.77%) and 764 times of transitions(48.23%).And(2 776) insertions/deletions(InDels) were recognized,most of them were shorter than(27 bp)(90%) with the 48.56% of(1 bp) InDels.The above results have provided the data to illustrate the diversity of the two silkworm strains in the genomic level.
【Fund】: 浙江省科技厅项目(编号2004C32048)
【CateGory Index】: S881
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