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《Acta Zootaxonomica Sinica》 2010-04
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SPECIES VALIDITIES ANALYSES OF CHINESE COILIA FISHES BASED ON MTDNA COⅠ BARCODING

ZHOU Xiao-Du,YANG Jin-Quan,TANG Wen-Qiao,LIU Dong Laboratory of Ichthyology,Shanghai Ocean University;Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources,Ministry of Education,Shanghai 201306,China  
This paper analyses 150 partial COⅠ gene sequences from six populations,which are Coilia nasus,C.nasus taihuensis,C.brachygnathus,C.grayii and C.mystus including Changjiang and Zhujiang populations.63 haplotypes are detected and the singleton sites mainly focus on the area near to the 100 bp and 600 bp.The genetic distances among Coilia nasus,C.nasus taihuensis and C.brachygnathus,ranging from 0.253 % to 0.557 %,are significant lower than 2 %,which is the threshold of the DNA barcoding species identification,indicating that C.brachygnathus,C.nasus taihuensis are the synonym of C.nasus.However the two C.mystus populations exhibit large genetic distance (5.08 %) which is far beyond 2 %.Our results suggest that these two C.mystus populations might be considered at the species or subspecies level in terms of genetic data.Engraulis japonicas as out-group,neighbor-joining,maximum parsimony and maximum likelihood methods were employed for phylogenetics analysis,respectively.Phylogenic analyses demonstrate that C.nasus,C.nasus taihuensis,and C.brachygnathus can't form monophyletic clades respectively but disturb disorderly whereas the two C.mystus populations are divided into two branch according to geographical sites and the C.grayii population forms monophyletic clades.The study indicates the barcode of COⅠ gene can identify the Coilia species firmly in China.
【Fund】: 上海市科学技术委员会重点攻关项目(08391910200);; 上海市教育委员会E-研究院项目(E03009);; 上海市重点学科建设项目(S30701)资助
【CateGory Index】: Q953;Q959
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