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《Acta Electronica Sinica》 2007-08
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Research on Optimizing the Template Frame in DNA Computing

LIU Wen-bing1,CHEN Li-chun1,BAI Bao-gang1,ZHU Xiang-ou1,ZHANG Qiang2,MA Run-nian3 (1.College of Computer Science and Engineering,Wenzhou University,Wenzhou,Zhejiang 325027,China; 2.University Key Laboratory of Information Science and Engineering,Dalian University,Dalian,Liaoning 116622,China;3.Telecommunication Engineering Institute,Air Force Engineering University,Xi'an,Shaanxi 710077,China)  
The encoding problem is a most fundamental issue in DNA based computing.Its difficulty lies in how can we assure that each code could accurately identify itself in linear DNA sequences.Therefore,how to use those codes effectively becomes an urgent problem.In this paper,we introduce the concept of template frame and its shift distance property based on the template strategy.Then,we study the influence of the length of labels,single labels and multiple labels on the shift distance.The result shows that the multiple label method can improve the shift distance property dramatically.Finally,we point out some possible directions for further studying.
【Fund】: 国家自然科学基金(No.60403002 60403001 30670486);; 中国博士后科学基金(No.2004036130);; 浙江省自然科学基金(No.Y106654 Y405553)
【CateGory Index】: TP18
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【References】
Chinese Journal Full-text Database 1 Hits
1 ZHENG Xue-dong,XU Jin(Dept.of Control Science and Engineering,Huazhong Univ.of Science and Technology,Wuhan 430074,China);Parallel DNA arithmetic computation based on 4-moduli set[J];Systems Engineering and Electronics;2009-04
【Co-citations】
Chinese Journal Full-text Database 1 Hits
1 LIU Wen-bin~(1,2),ZHU Xiang-ou~1,WANG Xiang-hong~1,CHEN Li-chun~1(1.School of Computer Science and Engineering,Wenzhou University,Wenzhou,Zhejiang 325027,China;2.Department of Control Science and Engineering,Huazhong University of Science & Technology,Wuhan,Hubei 430074,China);Progress in the Research of DNA Computing[J];Acta Electronica Sinica;2006-11
【Co-references】
Chinese Journal Full-text Database 10 Hits
1 LI Tao(College of Information Engineering,TaiYuan University of Technology,TaiYuan 030024,China);Using DNA Computing to Solve Max Clique Problem[J];Journal of Electric Power;2006-03
2 LIU Wen bin 1,2 ,GAO Lin 3,WANG Shu dong 1,2 ,LIU Xiang rong 1,XU Jin 1 (1.Department of Control Science and Engineering,Huazhong University of Science and Technology,Wuhan,Hubei 430074,China; 2.College of Information Science and Engineering,Shandong University of Science and Technology,Taian,Shandong 271019,China; 3.National Key Lab.of Radar Signal Processing,Xidian Univ.,Xi'an,Shanxi 710071,China);A Surface-Based DNA Algorithm for Maximal Matching Problem[J];Acta Electronica Sinica;2003-10
3 ZHU Xiang-ou~(1,2),LIU Wen-bing~(1,2),SUN Chuan~(2,3) (1.College of Computer Science and Engineering,Wenzhou University,Wenzhou,Zhejiang 325027,China; 2.System Science Research Institute,Huazhong University of Science and Technology,Wuhan,Hubei 430074,China; 3.Department of Mechanic and Electronic Engineering,Huangshi Institute of Technology,Huangshi,Hubei 435003,China);Research on the DNA Words and Algorithm[J];Acta Electronica Sinica;2006-07
4 Liu Wen-bing① Zhu Xiang-ou① Wang Wiang-hong① Zhang Qiang② Ma Run-nian③ ①(College of Computer Science and Engineering, Wenzhou University, Wenzhou 325035, China) ②(University Key Lab of Information Science & Engineering, Dalian University, Dalian 116622, China) ③(Telecommunication Engineering Institute, Air Force Engineering University, Xi’an 710077, China);A New Method to Optimize the Template Set in DNA Computing[J];Journal of Electronics & Information Technology;2008-05
5 Zhou Kang1a,2 Yin Yanfang1b Li Yuhua1a Qin Lei1a (1 a Department of Mathematics and Physics;b Department of Mechanical Engineering,Wuhan Polytechnic University,Wuhan 430023,China;2 Departmentof Control Science and Engineering,Huazhong University of Science and Technology,Wuhan 430074,China);Analysis of DNA encoding by using the model[J];Journal of Huazhong University of Science and Technology(Nature Science Edition);2007-07
6 Zhou Kang1,2 Tong Xiaojun1,2 Xu Jin2(1 Department of Mathematics and Physics,Wuhan Polytechnic University,Wuhan 430023,China;2 Department of Control Science and Engineering,Huazhong Universityof Science and Technology,Wuhan 430074,China);DNA computing-based algorithm for assignment problems[J];Journal of Huazhong University of Science and Technology(Nature Science Edition);2008-02
7 Zhou Kang1,2 Qin Lei1 Gao Jing1 Tong Xiaojun1,2(1 Department of Mathematics and Physics,Wuhan Polytechnic University,Wuhan 430023,China;2 Department of Control Science and Engineering,Huazhong University of Scienceand Technology,Wuhan 430074,China);Application of DNA computing to circuitry designs[J];Journal of Huazhong University of Science and Technology(Nature Science Edition);2008-08
8 Shen Shiyi Zhang Tuo(School of Mathematic Science,Nankai University,LMPC,Tianjin 300071);Mutation Error Correction in DNA Computing[J];Computer Engineering and Applications;2006-07
9 ZHU Xiang-ou,LIU Wen-bin,CHEN Li-chun,WANG Xiang-hong College of Computer Science and Engineering,Wenzhou University,Wenzhou,Zhejiang 325035,China;Calculating Hamming distance of DNA codes with linear constructions[J];Computer Engineering and Applications;2007-25
10 WANG Zi-cheng ZHOU Kang LUO Liang QIANG Xiao-li Key Laboratory of Image Processing and Intelligent Control,Department of Control Science and Engineering,Huazhong University of Science and Technology,Wuhan 430074,China;Research of filtering function on coding sequence in DNA computing[J];Computer Engineering and Applications;2008-32
【Secondary Citations】
Chinese Journal Full-text Database 10 Hits
1 Hong Xianlong (Department of Computer Science and Technology Tsinghua universith, Beijing 100084);A performance-Driven Steiner Tree Algorithm Using Constructed Force Directed Approach for Global Routing[J];CHINESE JOURNAL OF SEMICONDUCTORS;1995-03
2 GAO Lin1,XU Jin2,ZHANG Jun-ying1 (1National Key Lab.of Radar Signal Processing,Xidian Univ.,Xi'an,Shanxi 710071,China; 2Department of Control Science and Engineering,HUST,Wuhan,Hubei 430074,China);A Survey of DNA Computing[J];Acta Electronica Sinica;2001-07
3 LIU Wen bin 1,2 ,GAO Lin 3,WANG Shu dong 1,2 ,LIU Xiang rong 1,XU Jin 1 (1.Department of Control Science and Engineering,Huazhong University of Science and Technology,Wuhan,Hubei 430074,China; 2.College of Information Science and Engineering,Shandong University of Science and Technology,Taian,Shandong 271019,China; 3.National Key Lab.of Radar Signal Processing,Xidian Univ.,Xi'an,Shanxi 710071,China);A Surface-Based DNA Algorithm for Maximal Matching Problem[J];Acta Electronica Sinica;2003-10
4 ZHANG Qing You, XU Lu * (Changchun Institute of Application Chemistry, Chinese Academy of Sciences, Changchun 130022, China);Graphical Representation and the Similarity of DNA Primary Sequences[J];Chemical Research In Chinese Universities;2002-07
5 MoHongwei, JinHongzhang, WangKejun (Automation College,Harbin Engineering University, Harbin 150001, China);The Study of Intelligence Algorithm Based on Biology System[J];Heilongjiang Electronic Technology;2002-02
6 Yin Yimei Lin Xiangqin (University of Science & Technology of China, Department of Chemistry, Hefei 230026, China);Progress on Molecular Computer[J];Progress In Chemistry;2001-05
7 Chen Dongling; Liu Xikui; Wang Shudong (Dept. of Appl. Math. & Software Eng.,Shandong Institute of Mining and Technology, Taian,Shandong, 271019);THE INCIDENCE CHROMATIC NUMBER AND THE INCIDENCE COLORING CONJECTURE OF GRAPHS[J];MATHEMATICS IN ECONOMICS;1998-03
8 Zhang Lianzhen Liu Guangwu Xu Jin(Department of Control Science&Engineering,Huazhong University of Science&Technology,Wuhan430074);The Research of DNA Computing Model by Operating on Plasmids[J];Computer Engineering and Applications;2004-04
9 XU Jin 1) ZHANG Lei 2) 1) (Institute of Biomolecular Computer, Huazhong University of Science and Technology, Wuhan 430074) 2) (Department of Technology, China Construction Bank, Beijing 100077);DNA Computer Principle, Advances and Difficulties (I):Biological Computing System and Its Applications to Graph Theory[J];Chinese Journal of Computers;2003-01
10 GAO Lin 1)** , MA Run Nian 1) , XU Jin 2) ( 1) Electronic Engineering Research Institute, Xidian University, Xian 710071, China; 2) System Science Research Institute, Huazhong University of Science and Technology, Wuhan;The Molecular Algorithm of The Matching Problem Based on Plasmid DNA[J];Progress In Biochemistry and Biophysics;2002-05
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