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《Journal of Shanxi Agricultural Sciences》 2010-05
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Assessment of Genetic Diversity in Common Rice Oryza rufipogon

WANG Xing- chun1,YANG Zhi- rong1,WEI Xing- hua2 (1.College of life Science,Shanxi Agricutural University,Taigu 030801,China; 2.State Key Laboratory of Rice Biology,China National Rice Research Institute,Hangzhou 310006,China)  
For broadening the choice of parents in cross breeding to change current limited genetic basis, 30 SSR(simple sequence repeats)primer pairs that disperse on 12 chromosomes in rice were used to study genetic diversity among 20 Oryza rufi- pogon Griff rice varieties. All the 30 SSR markers generated polymorphic bands revealing 100% polymorphism. Total 220 poly- morphic bands were detected among 20 varieties. The number of alleles (A)per locus ranged from 3 to 11 with an average of 7.3 alleles. Cluster analysis showed that all cultivars could be classified into 3 groups, two abroad groups and one native group. Almost all materials collected from the same region could be clustered together. Some materials from various regions could also be clus-tered together indicating that these materials have close genetic relationship with gene communion. This indicated SSR markers play an important role in ecotype classification and study of genetic diversity. The choice of parents in cross breeding could not be based only on its ecotype.
【Fund】: 国家973计划资助项目(2004CB117201);; 浙江省重点科研国际合作项目(2006C24012)
【CateGory Index】: S511.9
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【References】
Chinese Journal Full-text Database 1 Hits
1 XUE Jin-ai1,ZHAO Yan-hong2(1.College of Agronomy,Shanxi Agricultural University,Taigu 030801,China; 2.College of Biological Science,Ludong University,Yantai 264045,China);Distribution Characteristics and Utilization of SSRs in Nicotiana tabacum[J];Journal of Shanxi Agricultural Sciences;2011-04
【Citations】
Chinese Journal Full-text Database 10 Hits
1 YANG Jing1.2,LIU Haiying2,QIAN Chunrong3,JIN Zhenxun2(1.Harbin Academy of Agricultural Sciences,Harbin 150070,China; 2.College of Agriculture,Northeast Agricultural University,Harbin 150030,China; 3.Crop Tillage and Cultivation Institute,Heilongjiang Academy of Agricultural Sciences,Harbin 150086,China);Analysis on genetic diversity of rice varieties in Heilongjiang Province by using SSR[J];Journal of Northeast Agricultural University;2008-06
2 WANG Yanhong1,WANG Hui1,Gao Lizhi2(1 College of Agriculture,Academy of Agriculture Science,Northwest SciTech University of Agriculture and Forestry,Yangling,Shaanxi 712100,China;2 Department of Genetics,University of Georgia,Life Building,Athens,GA 30605,U.S.A);Study on genetic diversity of Oryza rufipogon Griff.by simple seqence repeat[J];Acta Botanica Boreali-occidentalia Sinica;2003-10
3 Zheng Jingsheng 1,2 Chen Liangbing 1 Fu Wenying 3 Li Yizhen 1* 1 Hainan Provincial Institute of Tropical Agricultural Resource, Sanya, 572025 2 Institute of Rice and Wheat of Fujian Academy of Agricultural Sciences, Fuzhou, 350019 3 College of Life Science and Agronomy, Hainan University, Haikou, 570228;Genetic Diversity of Different Wild Rice Genomes Revealed by SSR Markers[J];Molecular Plant Breeding;2004-01
4 CHEN Ying-hua,LI Hong-yu,HOU Yu-ming,XU Zheng-jin,YUAN Yuan,LI Mao-bai(Key Laboratory of Crop Physiology,Ecology,Genetics and Breeding,Ministry of Agriculture,Key Laboratory of Northern Japonica Rice Breeding of Liaoning Province,Shenyang Agricultural University,Shenyang 110161,China);Genetic Diversity of Rice Germplasm Resources in Northeast Region of China[J];Acta Agriculturae Boreali-Sinica;2009-03
5 YANG Zhi-rong1,2,LI Run-zhi2,WEI Xing-hua1(1State Key Laboratory of Rice Biology,China National Rice Research Institute,Hangzhou 310006,China; 2 Center for Agricultural Biotechnology,Shanxi Agricutural University,Taigu Shanxi 030801,China);Genetic Diversity Analysis of indica Rice Varieties Based on SSR Markers[J];Journal of Shanxi Agricultural Sciences;2008-08
6 ZHANG Xiao-Li1,2,Guo Hui3,WANG Hai-Gang1,2,L Jian-Zhen2,YUAN Xiao-Ping2,PENG Suo-Tang1,,and WEI Xing-Hua2,(1 Shanxi Agricultural University,Taigu 030801,Shanxi;2 State Key Laboratory of Rice Biology,China National Rice Research Institute,Hangzhou 310006,Zhejiang;3 Guangxi University,Nanning 530004,Guangxi,China);Comparative Assessment of SSR Allelic Diversity in Wild and Cultivated Rice in China[J];Acta Agronomica Sinica;2008-04
7 LIU Wei~(1,2),LI Zi-chao~2,SHI Yan-li~1,MA Hong-wen~1,WANG Jian~1,ZHANG Hong-liang~2(1.The Crop Research Institute of Ningxia Academy of Agricultural and Forestry Sciences,Ningxia Yongning 750105,China;2.Department of Plant Genetics and Breeding,China Agricultural University,Beijng 100094,China);Genetic diversity of Japonica rice varieties based on SSR markers[J];Southwest China Journal of Agricultural Sciences;2005-05
8 HE Hua-Qin~(1,2),JIA Xiao-Li~2,LIANG Yi-Yuan~2,SHEN Li-Hua~2,SONG Bi-Qing~(1,2), GUO Yu-Chun~(2),LIANG Kang-Jing~2 ,LIN Wen-Xiong~(1,2,①) ( 1.College of Life Science,Fujian Agriculture and Forestry University,Fuzhou 350002,China; 2.Key Laboratory of Pesticide and Chemical Biology,Ministry of Education, Fujian Agriculture and Forestry University ,Fuzhou 350002,China );Assesment of Genetic Diversity of Allelopathic Rice Germplasm Based on RAPD and ISSR[J];Acta Genetica Sinica;2004-09
9 YU Ping~(1),LI Zi-Chao~(1,①),ZHANG Hong-Liang~1,LI Dao-Yuan~2, WANG Mei-Xing~1,SUN Jun-Li~1,WANG Xiang-Kun~1 ( 1.Key Lab of Crop Genomics and Genetic Improvement,Ministry of Agriculture;Key Lab of Crop Genetic Improvement,China Agricultural University,Beijing 100094,China; 2.Institute of Rice Research,Academy of Agricultural Science in Guangxi Province,Nanning 530007,China );Genetic Diversity of Common Wild Rice ( Oryza rufipogon Griff) by Using SSR Markers and Phenotypic Traits in Guangxi Province[J];Acta Genetica Sinica;2004-09
10 XIE Jian-Kun~1,KONG Xiang-Li~2,BAO Jin-Song~2,WAN Yong~1 chang 330200,China; 2.Institute of Nuclear Agricultural Sciences,Zhejiang University,Huajiachi Campus,Hangzhou 310029,China);Recent Advances in Molecular Mapping and Cloning of Useful Genes from Wild Rice and Their Application in Breeding[J];Hereditas(Beijing);2004-01
【Co-citations】
Chinese Journal Full-text Database 10 Hits
1 ZHANG Hui1,JIANG Yong2 (1.China Rural Technology Development Center,Beijing 100045,China; 2.High-tech Research Center,Shandong Academy of Agricultural Sciences,Jinan 250100,China);Discrimination of Indica or Japonica Based on Cheng's Method and SSR Markers[J];Shandong Agricultural Sciences;2009-03
2 Huo Yuyan et al. (School of Life Sciences,Yangtze University,Jingzhou 434025,China);Research Overview on Application of SSR Markers in Rice[J];Anhui Agricultural Science Bulletin;2010-23
3 Xiang Taihe et al (Rice Research Institute and Key Laboratory of Rice Genetics and Breeding of Agricultural Ministry,Anhui Academy of Agricultural Sciences,Hefei 230031);Preliminary Study on Transferring Antibacterial Polypeptide Shiva A Gene into Restorer Line Minhui 63 of Hybrid Rice Via Agrobacterium mediated Gene Transformation System[J];Journal of Anhui Agricultural Sciences;1999-06
4 Ni Dahu et al (Rice Research Institute and Key Laboratory of Rice Genetics and Breeding of Agricultural Ministry Anhui Academy of Agricultural Sciences.Hefei 23001);Study on Transfering Antibacterial Polypetide Shiva A Gene Into Restore Line Minhui 63 by Low Energy Ion Beam[J];Journal of Anhui Agricultural Sciences;2000-04
5 Li Dahu et al (The Rice Research Institute Key Lab.of Rice Geretics and Breeding of MOA,AAAS, Hefei 230031);Study on the Improvement of Rice with the Resistance to Bacterial Blight through the Method of Molecular Marker Assisted Selection[J];Journal of Anhui Agricultural Sciences;2001-06
6 CAI Guang-ze et al (Science and Technology Division of Xichang University,Xichang,Sichuan 615013);ISSR Analysis of Genetic Diversity of Specific Japonica Rice Varieties[J];Journal of Anhui Agricultural Sciences;2006-23
7 WU Chao et al (Shenyang Agricultural University,Shenyang,Liaoning 110161);Research on Harvest Index of Transgenic Brittle Rice[J];Journal of Anhui Agricultural Sciences;2007-19
8 SONG Feng-shun et al(Rice Institute,Anhui Academy of Agricultural Sciences,Hefei,Anhui 230031);A Quick DNA Extraction Method from Single Rice Seeds[J];Journal of Anhui Agricultural Sciences;2007-21
9 HAN Fei et al (Key Laboratory of Tropic Biological Resources of Ministry of Education,Hainan University,Haikou,Hainan 570228);Research on Excellent Gene in Common Wild Rice in China[J];Journal of Anhui Agricultural Sciences;2007-25
10 LAI Qun-zhen (Rice Research Institute,Guangxi Academy of Agricultural Sciences,Nanning,Guangxi 530007);Study on Standard Sample Collecting in Field for Agricultural Wild Plant Germplasm Resources[J];Journal of Anhui Agricultural Sciences;2007-35
China Proceedings of conference Full-text Database 10 Hits
1 QI Yong-wen ZHANG Hong-liang ZHANG Dong-ling WANG Mei-xing SUN Jun-li WANG Xiang-kun LI Zi-chao Key Laboratory of Crop Genomics and Genetic Improvemen of Ministry of Agriculture and Beijing Key Laboratory of Crop Genetic Improvement,China Agricultural University,Beijing 100094 WEI Xing-hua Tang Sheng-xiang Chinese Rice Research Institute,Hongzhou,310006; QIU Zong-en CAO Yong-sheng Institute of crop science,Chinese Academy of Agricultural Science,Beijing,100081;Genetic diversity of rice cultivars in China assessed by microsatellite and phenotypic traits[A];[C];2005
2 LIU Wei~(1,2) LI Zi-chao~2 SHI Yan-li~1 MA Hong-wen~1 WANG Jian~1 ZHANG Hong-liang~2 1.The Crop Research Institute of Ningxia Academy of Agricultural and Forestry Sciences,Ningxia Yongning 750105,China; 2.Department of Plant Genetics and Breeding,China Agricultural University,Beijng 100094,China;Genetic diversity of Japonica rice varieties based on SSR markers[A];[C];2005
3 Liu Chengming and Mei Mantong ( College of Horticulture , Genetic Engineering Laboratory, College of Life Scicence , South China Agricultural University, Guangzhou 510642);Researches on DNA isolation and Optimal Parameters of RAPD in Some Sapindaceae Fruit Trees[A];[C];2002
4 PENG Bo1, 2 HU Xing-Ming2 DENG Wen2 YE Chu-Hua2 ( 1Wuhan University of College of Life Sciences, Wuhan 430072, China; 2 Industrial Crops Institute of Hubei Academy of Agricultural Sciences, Wuhan 430064, China);Correlation Analysis of SSR Markers and Phenotypic Trait in Mulberry[A];[C];2009
5 Lei Kairong Chongqing Academy of Agricultural Sciences, Chongqing Engineering Research Center for Crop Biotechnology, Chongqing, 400055;Application of Molecular Marker Technology in Crop Germplasm Evaluation[A];[C];2006
6 Jingyu Wang;Xiaofu Zhou;Xiuyun Lin;Mingsheng Li;Chenghai Jin;Guicai Wang Rice Institute, Jilin Academy of Agricultural Sciences Gongzhuling 136100 Gene Engineering Institute, Jilin Normal University Siping 136000;Setting Up of Japonica Rice Transformation System Via Biolistic[A];[C];2003
7 CHEN Rong-bing LIN Zheng-he CHEN Chang-song YOU Xiao-mei (Tea Research Institute,Fujian Acaedemy of Agricultrual Sciences, Fu’an Fujian 355014,China);Assessment of Genetic Diversity of Tea Detected by RAPD and ISSR[A];[C];2007
8 Qiao Ting-ting, Ma Chun-lei, Zhou Yan-hua, Yao Ming-zhe, Chen Liang* Research Center for Tea Germplasm and Improvement, Tea Research Institute Chinese Academy of Agricultural Sciences; National Center for Tea Improvement, Hangzhou 310008, China;EST-SSR Analysis of Genetic Diversity and Structure of Tea Landraces and Bred Cultivars in Zhejiang Province,China[A];[C];2009
9 ZHAO Wei-Guo, MIAO Xue-Xia, Zang Bo, ZHANG Lin, PAN Yi-Le, HUANG Yong-Ping (Sericultural Research Institute, Chinese Academy of Agricultural Sciences, Zhenjiang City, Jiangsu Province 212018, China; Shanghai Institute of Plant Physiology and Ecology, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China; Jianghan Petroleum Bureau, Department of Agricultural and Forestry,Qianjiang city, Hubei Province, 433124, China);Construction of fingerprinting and genetic diversity of mulberry cultivars in China by ISSR markers[A];[C];2005
10 SHEN Shi-quan,ZENG Ya-wen,PU Xiao-ying ,DU Juan,LI Shen-chong, (Biotechnology and Genetic Resources Institute, Yunnan Academy of Agricultural Sciences, Kunming 650205);Ecogeographic Research of Relative Plant Dry Weight of Core Collection in Yunnan Rice Landrace Under Phosphorus Deficiency[A];[C];2004
【Co-references】
Chinese Journal Full-text Database 10 Hits
1 JIN Ji-qiang1,CUI Hai-rui1*,CHEN Wen-yue2,LU Mei-zhen1,YAO Yan-ling1,XIN Ya2,GONG Xiao-chun1(1.Institute of Nuclear and Agricultural Sciences,Zhejiang University,Hangzhou 310029,China;2.Hangzhou Academy of Agricultural Sciences,Hangzhou 310024,China);Data Mining for SSRs in ESTs and Development of EST-SSR Marker in Tea Plant (Camellia sinensis)[J];Journal of Tea Science;2006-01
2 LIU Sheng-chuan,LIU Ren-xiang,LEI Hong-mei,CHEN Chun-yan(College of Agriculture,Guizhou University,Guiyang,Guizhou 550025,China);Genetic Diversity of Some Tobacco Germplasms by Using SSR Technique[J];Guizhou Agricultural Sciences;2009-07
3 SANG Li-qun,WANG Chang-you,WANG Qiu-ying,JI Wan-quan(Agronomy College,Northwest Agricultural and Forestry University,Yangling 712100,China);SSR Markers of a Common Wheat Germplasm N9659 with Powdery Mildew Resistance Gene[J];Acta Agriculturae Boreali-Sinica;2008-03
4 GE Jia1,2 XIE Hua1 CHUI Chong-Shi3 HONG Jian-Ming2 MA Rong-Cai 1, 2** (1. Beijing Agro-biotechnology Research Center, Beijing 100089,China; 2.College of Life Science, Capital Normal University, Beijing 100037, China; 3. Vegetable College, Northeast Agricultural University, Harbin 150030,China);Analysis of Expressed Sequence Tags (ESTs) Derived SSR Markers in Chinese Cabbage (Brassica campestris L.ssp. pekinensis)[J];Journal of Agricultural Biotechnology;2005-04
5 YANG Cheng-jun1, WANG jun1, MU Li-qiang1, LI Shao-chen1, LIU Guan-jun1, HU Chang-qun2 (1.College of Forestry, Northeast Forestry University, Harbin 150040, China; 2.Jilin Provincial Academy of Forestry Science, Changchun 130033, China);Development of EST-SSR Marker in Panax ginseng[J];Journal of Agricultural Biotechnology;2008-01
6 WANG Hua Chun,CHEN Qing Xuan(Institute of Developmental Biology ,The Chinese Academy of Sciences,Beijing 100080, China).;Get the Best Use of dbEST.[J];PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS;2000-04
7 Hu Zhongyi Cai Liuti Chen Xingjiang (Tobacco Science Resource Institute of Guizhou Province,Guiyang 550003);Analysis of SSR Information in ESTs Resource of Tobacco(Nicotiana tabacum)[J];Biotechnology Bulletin;2009-07
8 CHEN Hong-ge 1,2 ,JIA Xin-cheng 1 (1.Bioengineering College,Henan Agricultural University,Zhengzhou450 002;2.Resource and Environment College,Nanjing Agricultural University, Nanjing210095,China);Expressed sequence tags and their applications[J];Letters in Biotechnology;2003-01
9 CHEN Jun-Fang 1,2.,REN Zheng-Long2,GAO Li-Feng1,JIA Ji-Zeng 1,*. ( .1Key Laboratory of Crop Germplasm & Biotechnology, Ministry of Agriculture, Institute of Crop Germplasm Resources, Chinese Academy of Agricultural Sciences, Beijing 100081; .2 Department of Plant Breeding and Genetics, Sichuan Agricultural University, Ya'an 625014, Sichuan, China);Developing New SSR Markers from EST of Wheat[J];Acta Agronomica Sinica;2005-02
10 Xin Ya~ 1,3 ,Cui Hairui~ 1 ,Lu Meizhen~ 1 , Yao Yanling~ 1 , Jin Jiqiang~ 1 , Lim Yongpyo~ 2 , and Choi Suryun~ 2 ( ~1Institute of Nuclear and Agricultural Sciences,College of Agriculture and Biotechnology,Zhejiang University,Hangzhou, Zhejiang 310029,China; ~2Department of Horticulture, Chungnam National University,Taejeon 305-764,Korea; ~3Biotechnology Research Institute, Hangzhou Academy of Agricultural Sciences, Hangzhou, Zhejiang 310024,China);Data Mining for SSRs in ESTs and EST-SSR Marker Development in Chinese Cabbage[J];Acta Horticulturae Sinica;2006-03
【Secondary Citations】
Chinese Journal Full-text Database 10 Hits
1 SHEN Peng,LUO Qiu-xiang,JIN Zheng-xun (Agronomy College,Northeast Agricultural University,Harbin,Heilongjiang, 150030,PRC);Relationship between protein content and the cooking and eating quality properties of rice grain[J];Journal of Northeast Agricultural University;2003-04
2 HAI Lin 1,WENG Yue jin 2 (1 Institute of Crop Breeding and Cultivation,Chinese Academy of Agricultural Sciences,Beijing 100081,China;2 Institute of Crop Germplasm Resources,Chinese Academy of Agricultural Sciences,Beijing,100081 China);Genetic diversity of salt-tolerant wheat germplasm by RAPD[J];Acta Botanica Boreali-occidentalia Sinica;2000-06
3 ZHOU Wei-bin, SHI Xi, ZHAN Shu-xuan, SUN Chong-rong, CAO Kai-ming (Department of biochemistry, School of Life Sciences, Fudan University, Shanghai 200433 ,China);Molecular Cloning and Analysis of Nucleotide Binding Site Homologues in Oryza rufipogon[J];Journal of Fudan University;2001-05
4 Wang Zhen Fang Xuanjun Hainan Provincial Key Laboratory of Crop Molecular Breeding, Hainan Provincial Institute of Tropical Agriculture Resource, Sanya, 572025;Plant DNA Isolation[J];Molecular Plant Breeding;2003-02
5 Zheng Jingsheng 1,2 Lü Bei 1 1 Hainan Provincial Key Laboratory of Crop Molecular Breeding,Sanya,572025 2 The Institute of Rice&wheat,Fujian Academy of Agricaltural Sciences,Fuzhou,350019;PCR Technique and its Practical Methods[J];Molecular Plant Breeding;2003-03
6 Zheng Jingsheng 1,2 Chen Liangbing 1 Fu Wenying 3 Li Yizhen 1* 1 Hainan Provincial Institute of Tropical Agricultural Resource, Sanya, 572025 2 Institute of Rice and Wheat of Fujian Academy of Agricultural Sciences, Fuzhou, 350019 3 College of Life Science and Agronomy, Hainan University, Haikou, 570228;Genetic Diversity of Different Wild Rice Genomes Revealed by SSR Markers[J];Molecular Plant Breeding;2004-01
7 Wang Jinhua1,2 Luo Wenyong1 Chen Jianwei1 Liu Yuanfeng1,2 Wu Qiuhua1,2 Li Xiaofang1*1 Rice Research Institute Academy of Guangdong Agricultural Sciences, Guangzhou, 510640; 2 College of Life Science, South China Normal University, Guangzhou, 510631* Corresponding author, lixiaofang38@263.net;Genetic Diversity in Cultivated Fragrance Rice Varieties Revealed by SSR and ISSR Markers[J];Molecular Plant Breeding;2005-01
8 RUAN Ren chao, CHEN Hui cha, YANG Yu shun, JIN Tao ye, YOU Jun mei(Institute of Rice, Guizhou Academy of Agricultural Sciences, Guiyang 550006 CHINA);Screening of Rice (Oryza sativa ) Germplasm with Restoring Genes to CMS from Local Varieties Collected in Guizhou[J];Guizhou Agricultural Sciences;1999-06
9 CHEN Hui cha, ZHANG Zai xing, RUAN Ren chao, YANG Yu shun, JIN Tao ye, YOU Jun mei(Institute of Rice, Guizhou Academy of Agricultural Sciences, Guiyang 550006 CHINA );Evaluation and Identification of Tolerance to Cold and Resistance to Drought on Guizhou HE(Oryza sativa) Germplasm Resources[J];Guizhou Agricultural Sciences;1999-06
10 CHEN Hui cha JIN Tao ye YOU Jun mei RUAN Ren chao YANG Yu shun (Rice Institute,Guizhou Academy of Agricultural Sciences,Guiyang 550006);Analysis and Evaluation on Quality Characters of Rice Germplasm Resources in Guizhou[J];GUIZHOU AGRICULTURAL SCIENCES;1998-03
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