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《Journal of Plant Genetic Resources》 2010-06
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Genetic Diversity Analysis of Foxtail Millet Accessions Revealed by SSR Markers

ZHU Xue-hai1,2,ZHANG Yan-hong3,SONG Yan-chun1,ZHAO Zhi-hai2,LIU Zhi-zhai1,SHI Yun-su1,LI Yu1,WANG Tian-yu1(1Institute of Crop Sciences,Chinese Academy of Agricultural Sciences,Beijing 100081;2Zhangjiakou Institute of Agricultural Sciences,Zhangjiakou 075000;3Faculty of Science,Hebei North University,Zhangjiakou 075000)  
120 foxtail millet accessions selected from a core collection were genome-wide fingerprinted by 21 SSR molecular markers covered the 9 chromosomes of foxtail millet for the genetic diversity analysis.The results showed that a total of 305 alleles were captured,ranging from 3 to 26,averaged 14.5 alleles per locus,and the average PIC for all 21 SSRs was 0.809.The genetic similarities between accessions ranged from 0.8393 and 0.9672,with an average of 0.8906,based upon the SSR genotyping.Phylogenetic analysis of all the accessions was performed through the UPGMA method based on the genetic similarities.120 accessions were separated into four clusters with the similarity value of 0.8865.These four clusters based on the SSR genotyping agreed well with the geographical origination of these accessions,which were designated as the names of Northwest Inland Group,Loess Plateau and Inner Mongolia Group,North China Plain Group,and the Synthetic Group of North China Plain.
【Fund】: 国家自然科学基金(30571168);; “863”计划现代农业技术领域课题(2006AA100201);; 国家科技支撑计划课题(2006BAD13B03)
【CateGory Index】: S515
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