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《Molecular Plant Breeding》 2003-01
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The SNP Analysis of the Conserved Sequences of Ethylene Receptor Gene in Five Tropical Fruits

Han Jicheng 2,3 Fang Xuanjun 1,2* 1 Hainan Provincial Institute of Tropic Agriculture Resource, Sanya, 572025 2 Hainan Provincial Key Laboratory of Crop Molecular Breeding, Sanya, 572025 3 Changli Institute of Pomology, Hebei Academic of Agriculture and Forest, Changli, 066600  
The universal primer for amplifying conserved sequences of the ethylene receptor genes of five tropical fruits have been designed based on registered ethylene receptor genes (ers) in GenBank. The length of the conserved sequence from lytchee(Litch chinensis), mango(Mangifera indica) and wax apple(Syzygium samarangense) are 1440bp, and that from banana(Musa AAA Group) and papaya(Carica papaya) are 1441bp and 1439bp, respectively. Sequence analysis shows that these fragments have the 99% identities with the sequence of ethylene receptor gene (ers) of rice (Oryza Sativa), and 88% identities with that of maize (Zea mays). The sequence length polymorphism exits in one or two base pairs in obtained sequences. Each conserved sequence has 2 introns by comparing with the sequences registered in GenBank, the length of intron II is the same of 94bp in all tested tropical fruits. There are 2bp difference in intron I of banana and papaya, which the length is 373bp and 371bp, respectively. There are no difference in intron I of lytchee, mango and wax apple, which the length is 372bp. The single nucleotide variations were found in the conserved sequences of five tested tropic fruits. There are 19 SNPs (single nucleotide polymorphisms) in the obtained sequence, 12 SNPs of them in the introns, 7 SNPs of them in the encoding region. Lytchee has 4 SNPs in the encoding region more than that of others. The variation of SNPs in encoding region results in the changes of amino acids except the SNP site No.783.
【CateGory Index】: Q943
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【References】
Chinese Journal Full-text Database 10 Hits
1 CHEN Ji-bao et al(Nanyang Normal University,Nanyang,Henan 473061);The Distribution and Application of Single Nucleotide Polymorphism (SNP) in Plant[J];Journal of Anhui Agricultural Sciences;2009-31
2 Wang Zhen Fang Xuanjun Hainan Provincial Key Laboratory of Crop Molecular Breeding, Hainan Provincial Institute of Tropical Agriculture Resource, Sanya, 572025;Plant DNA Isolation[J];Molecular Plant Breeding;2003-02
3 Han Jicheng 1,2 Fang Xuanjun 1* 1 Hainan Provincial Key Laboratory of Crop Molecular Breeding, Hainan Provincial Institute of Tropic Agricultural Resource, Sanya, 572025 2 ChangLi Institute encoding Pomology,Hebei Academy of Agriculture and Forestry, Changli, 066600;Cloning and Analyzing of a cDNA for Ethylene Receptor,LcERS1, of Lychee (Litchi chinensis)[J];Molecular Plant Breeding;2003-03
4 Han Jicheng 1,2 Jiang Liangrong 1 Zheng Jingsheng 1,3 Li Yizhen 1* 1 Hainan Provincial Institute of Tropical Agricultural Resource, Sanya, 572025 2 Changli Institute of Pomology, Hebei Academy of Agricultural and Forest Sciences, Changli, 066600 3 Institute of Rice and Wheat of Fujian Academy of Agricultural Sciences, Fuzhou ,350019;Conserved Sequence Analysis of Ethylene Receptor from O.meyeriana of Hainan Island[J];Molecular Plant Breeding;2004-01
5 Han Jicheng Changli Institute of Pomology, Hebei Academy of Agriculture and Forest, Changli, 066600;Research Progress on Plant Ethylene Receptor and its Transgene[J];Molecular Plant Breeding;2004-02
6 Guo Encai Wang Guangpeng Kong Dejun Liu Qingxiang Zhang Xinzhong Han Jicheng Changli Institute of Polomogy, HeBei Academy of Agriculture and Forestry Sciences, Changli, 066600;The Genetic Linkage Map of Chinese Chestnut Based on RAPD Markers[J];Molecular Plant Breeding;2008-02
7 Zou Meiling et al.(Institute of Tropical Bioscience and Biotechnology,Chinese Academy of Troical Agricultural Sciences,Haikou 571101,China);Research Progress of Single Nuleotide Polymorphism in Crop Genetics and Breeding[J];Anhui Agricultural Science Bulletin;2012-23
8 HAN Ji-cheng~1,LE Wen-quan~1,WANG Guang-peng~1,ZU Wen- fang~1,ZHANG Xin-zhong~1,WANG Hai-bo~2* (1.Changli Institute of Pomology,Hebei Academy of Agriculture an d Forestry Science,Changli 066600,China;2.Institute of Genetics and Phy siology,Hebei Academy of Agriculture and Forestry Science,Shijiazhuang 050051,C hina);The RAPD Analysis of the Effects of Treatments with γ-~(60)Co on Red D'Anjou[J];Journal of Hebei Agricultural Sciences;2005-03
9 HAN Ji-cheng1,XU Ping2,LI Chun-min1,CHEN Hu1,ZHANG Xin-zhong1(1.Changli Institute of Pomology,Hebei Academy of Agriculture and Forestry Sciences,Changli 066600,China;2.Lulong Country Forestry Administration,Lulong 066500,China);Comparison of Four DNA Extraction Methods from Leaves of Juglans Sigillata[J];Journal of Hebei Agricultural Sciences;2007-01
10 LIU Guo-jian,LE Wen-quan,ZHANG Hai-e,ZU Wen-fang,ZHANG Xin-zhong,HAN Ji-cheng (Changli Institute of Pomology,Hebei Academy of Agriculture and Forestry Sciences,Changli 066600,China);RAPD Analysis of the Effect of Irradiation Treatment by γ-~(60)Co on Red D'Anjou Seeds[J];Journal of Hebei Agricultural Sciences;2008-04
China Proceedings of conference Full-text Database 1 Hits
1 ;番木瓜分子标记研究进展[A];[C];2006
【Co-citations】
Chinese Journal Full-text Database 10 Hits
1 LIU Qin-hong,WANG FU-rong,ZHANG Jun,YANG Jing,LI Ru-zhong,WANG Zong-wen(Shandong Cotton Research Center, Jinan 250100, China);Purity detection of Lumianyan 15 hybrid with SSR markers[J];Shandong Agricultural Sciences;2003-02
2 ZHANG Jun1,Wang Fu-rong1,LIU Qin-hong1,BAI Jin2,LIU Ren-zhong1(1Shandong Cotton Research Center, Jinan 250100,China;2Shandong Agricultural University,Taian 271018,China);Induction and identification of haploids of advanced hybridization of transgenic Bt upland cotton[J];Shandong Agricultural Sciences;2003-04
3 WANG Fu-rong,ZHANG Chuan-yun,LIU Guo-dong,LIU Ren-zhong,LIU Qin-hong,ZHANG Jun(Cotton Reseach Center,Shandong Academy of Agricultural Sciences, Jinan 250100,China);Variant germplasm obtained by pollen tube pathway technique and SSR analysis[J];Shandong Agricultural Sciences;2006-01
4 WEI Ze,SUN Xue-zhen,LIU Bin,ZHANG Xing-ju,WANG Fang,MA Jun,LIU Qing-cai,GUO Hai-gang,SONG Xian-liang(Agronomy College of Shandong Agricultural University/ National Key Laboratory of Crop Science,Taian 271018,China);Genetic Diversity of 57 Cotton Germplasm Resources from China and Overseas[J];Shandong Agricultural Sciences;2010-06
5 SUN Yan-lin et al (Institute of Bio-resources and Environment,Dalian Nationalities University,Dalian,Liaoning 116600);Exploitation of SSR Marker of Hippophae rhamnoides[J];Journal of Anhui Agricultural Sciences;2007-01
6 WEI Yang-lian et al(Key Laboratory for Plant Ex-situ Conservation in Jiangsu Province,Chinese Academy of Sciences(Nanjing Botanical Garden Mem.Sun Yat-Sen,Nanjing,Jiangsu 210014);Study on Atractylodes and Atracylodin-associated RAPD Markers in Mt. Maoshan[J];Journal of Anhui Agricultural Sciences;2008-24
7 YANG Kun et al (College of Chemistry and Life Science,Zhejiang Normal University,Jinhua,Zhejiang 321004);Study on the Isolation of the Flanking Sequences Adjacent to Transgenic T-DNA in Brassica napus Genome by an Improved Inverse PCR Method[J];Journal of Anhui Agricultural Sciences;2010-10
8 WANG Jing-yi et al(Biotechnology Research Institute of Tropical Crop,Chinese Academy of Tropical Agricultural Sciences,Key Laboratory of Tropical Agriculture Crop Biotechnology of MOA,Haikou,Hanan 571101);SSR Analysis of the Genetic Diversity of Banana Variety(Line)[J];Journal of Anhui Agricultural Sciences;2011-10
9 QIU You-wen et al (Life Science and Biotechnique Research Center of Northeast Agricultural University/Testing and Inspecting Center for GMO, Harbin, Heilongjiang 150030);Detection of Foreign Gene Copies in Transgenic Soybean by Taqman Quantitative PCR Technique[J];Journal of Anhui Agricultural Sciences;2011-17
10 TAN Yan-hua et al(Institue of Tropical Biotechnology,Chinese Academy of Tropical Agricultural Sciences,Haikou,Hainan 571101);Progress on Extraction Methods of DNA from Cotton[J];Journal of Anhui Agricultural Sciences;2011-32
China Proceedings of conference Full-text Database 10 Hits
1 JIANG Feng,LIU PengFei,ZHANG JinFeng,ZENG YongSan,XIE ZhenWen,WANG XiaoMing~* (College of Agronomy,Zhongkai University of Agriculture and Engineering,Guangzhou 510225,China);Genetic Analysis and QTL Mapping for Resistance to Bipolaria Maydis in Corn[A];[C];2010
2 Guan Qingmei, Ma Fengwang and Cheng Shunchang (Horticulture College, Northwest Science and Technology University of Agriculture and Forestry, Yangling Shaanxi 712100, China);Application of Antisense RNA in Horticultural Plant Gene Engineering[A];[C];2004
3 FAN Shu-li, YU Shu-xun, SONG Mei-zhen(Cotton Research Institute, Chinese Academy of Agricultural Sciences; Key Laboratory of Cotton Genetic Improvement, Ministry of Agriculture, Anyang, He′nan 455004,China);Construction of Molecular Marker Linkage Map in Short-season Cotton and Earliness QTLs Mapping[A];[C];2005
4 SUN Jun-ling~1, DU Xiong-ming~1, SUN Qi-xin~2, ZHOU Zhong-li~1, PAN Zhao-e~1, PANG Bao-yin~1(1. Cotton Research Institute, CAAS, Key Lab of Cotton Genetic Improvement, MOA, Anyang, He′nan 455004, China;2. China Agricultural University,Beijing 100094, China);Analysis on Genetic Variation of the Progeny of Cotton(Gossypium hirsutum L.) Irradiated by γ Ray[A];[C];2005
5 HE Dao-hua XING Hong-yi FAN Wan-fa YANG An-ming SUN Jing-ru MA Xing-rong (College of Agronomy,Northwest A & F University,Yangling,Shaanxi 712100,China);Genetic Diversity of Secondary Gene Pool of Gossypium hirsutum with SSR[A];[C];2008
6 LI Yu-qiang~1,CHEN Hao-dong~1,HONG Ya-hui~2,XIAO Cai-sheng~1,LI Xiang~1,ZHANG Zhi-gang~1 (1.Hu'nan Cotton Research Institute,National Hybrid Cotton Research Promotion Center, Changde,Hu'nan 415101,China;2.College of Biological Science and Technology,Hu'nan Agricultural University,Changsha 410128,China);Construction and Application of SSR Fingerprints of Hu'nan Hybrid Cotton Varieties[A];[C];2009
7 LIU Zhao-hui,ZENG Hua-lan,ZHANG Qian-fang,YE Peng-sheng,WEI Shu-gu,HE Lian,LI Qiong-ying (Industrial Crops Research Institute,Sichuan Academy of Agriculture Sciences,Jianyang 641400);Orthogonal Design Optimization on ISSR-PCR Reaction System in Cotton[A];[C];2010
8 SONG Xiao-Liang, Sun Xue-zhen, Liu Juan, Zheng Ximing, Zhang Tian-zhen ( Department of Agronomy of Shandong Agricultural University,Shandong Taian 271018; Wuyue Taishang Seed Corporation, Shandong Tan 271018; National Key Laboratory of Crop Genetics & Germplasm Enhancement, Cotton Research Institute, Nanjing Agricultural University, Jiangsu Nanjing 210095);Molecular Genetic Map and Fiber Quality OTL Analysis in Cotton[A];[C];2006
9 LI Jing, SHEN Fa-fu, YU Dong-hai, HAN Xiu-lan (Department of Agronomy, Shandong Agricultural University, Tai'an, Shandong 271018, China);The obtaining of transgenic cottons resistant to premature senescence[A];[C];2004
10 WEI yanglian HANG yueyu GE yanfen GAO xing WU baocheng Institute of Botany.Jiangsu Province & Chinese Academy of Sciences,Jiangsu Province key lab for plant ex situ conservation.Nanjing 210014;Population Authentication of Changium smyrnioides based on rDNA ITS Sequences[A];[C];2007
【Co-references】
Chinese Journal Full-text Database 10 Hits
1 Chen Xueping Jiang Ping Zhang Jieyu Lu Xingxing (Hefei Institute of Economics & Technology,Anhui 230052);Investigation of Esterase Isozymogram in Germplasm Resouces[J];JOURNAL OF ANHUI UNIVERSITY(NATURAL SCIENCES);1998-03
2 Li Zefu et al (Key Lab of Rice Genetics and Heredity, Anhui Academy of Agricultural Sciencs Hefei 230031);Types and Genetic Mechanisms of Plant Male Sterility[J];Journal of Anhui Agricultural Sciences;2000-06
3 Xu Yang et al (Nanyang Institute of Agricultural Science, Nanyang,Henan 473000);Application of Single Nucleotide Polymorphism in Soybean[J];Journal of Anhui Agricultural Sciences;2004-05
4 XU Zhen-biao et al (School of Life Science,Shandong University of Technology,Zibo,Shandong 255049);Gene Chip Technology and Modern Agriculture[J];Journal of Anhui Agricultural Sciences;2006-19
5 GAO Zhi-yong (Department of Chemistry and Chemical Engineering,Weinan Teachers College,Weinan,Shaanxi 714000);Application of Gene Chip in Detection of Gene Expression of Rice[J];Journal of Anhui Agricultural Sciences;2007-10
6 ZHAO Yong-liang et al(College of Biological Engineering,Henan University of Technology,Zhengzhou,Henan 450001);Study on the Genetic Diversity of Peroxidase and Amylase Isoenzymes in Lonicera japonica Thunb[J];Journal of Anhui Agricultural Sciences;2008-15
7 LIU Yue-guang~(1*),TENG-Yong yong~(3*),PAN Chen~1,HAN Yan-chuang~1,ZHOU Ming-quan~2,HU Zhong-li~(1,2**)(1 Key Lab of the Ministry of Education for Plant Developmental Biology,Wuhan University,Wuhan 430072;2 Lotus center,Wuhan University,Wuhan 430072;3 College of Life Sciellce,Xinyang Nomal University,Xinyang 46400,China);Cluster Analysis of Nelumbo Based on SRAP Markers[J];Amino Acids & Biotic Resources;2006-01
8 LI Juan,JIANG Chang-jun technology of Anhui Agricultural University, Anhui Province and Ministry of Science and Technology, Hefei 230036);Preliminary Construction of Core Germplasm of Camellia sinensis in China[J];Journal of Anhui Agricultural University;2004-03
9 WANG Hui1,2,3,ZHANG Hong-jun2,WU Xian-feng4,GAO Yong-ming2,XU Zheng-jin1,ZHU Lin-hua2,LI Zhi-kang2(1.School of Agronomy,Shenyang Agricultural University,Shenyang 110161; 2.Institute of Crop Sciences,Chinese Academy of Agricultural Sciences,Beijing 100081;3.Anhui Provincial Crop Introduction and Breeding Center,Hefei 230601;4.Guangde Institute of Agricultural Science,Guangde 242200);Progress in genetics of crop heterosis[J];Journal of Anhui Agricultural University;2010-01
10 ZHU Wei-Quan WANG Yi-Quan(Institute of Genetic Resources, College of Life Science, Nanjing Normal University, Nanjing 210097, China);AFLP and Its Application in Zoological Research[J];Chinese Journal of Zoology;2003-02
【Secondary References】
Chinese Journal Full-text Database 10 Hits
1 ZHU Mei-Xia et al (Hebei University of Engineering,Handan,Hebei 056038);Similarity Comparison and Evolution of Soybean and Cotton RGA[J];Journal of Anhui Agricultural Sciences;2005-02
2 QUAN Miao-hua et al(Department of Bioengineering,Huaihua University,Huihua,Hunan 418008);Key Hybridization Technology of Winged Bean and Molecular Identification of the F1 Hybrids[J];Journal of Anhui Agricultural Sciences;2007-14
3 LIU Wei-jin et al (Department of Bioengineering,Huaihua University,Huaihua,Hunan 418008);Study on A Simple and Efficient Preparation of Competent Cell and the Establishment of Plasmid Transformation System[J];Journal of Anhui Agricultural Sciences;2008-07
4 FAN Jian-xin et al(Guizhou Fruit Institute,Luodian,Guizhou 550100);Research Advance in the Induced Mutation Breeding of Fruit Tree[J];Journal of Anhui Agricultural Sciences;2008-22
5 HAN Ji-cheng et al(College of Horticulture,Northeast Agriculture University,Harbin,Heilongjiang 150051);Study on SSR Markers Linked to Flesh Color around the Stone of Prunus persica(L.) Batsch[J];Journal of Anhui Agricultural Sciences;2012-16
6 ZHANG Hui,ZHANG Xiao-ping,LI Xiao-hong,CHEN Wen-long(Key Laboratory for the Conservation and Utilization of Important Biological Resources in Anhui Province,Anhui Normal University,Wuhu 241000,China);Study on Extraction of Genomic DNA from Pteroceltis tatarinowii Maxim[J];Journal of Anhui Normal University(Natural Science);2011-03
7 JIANG Xiang-Hui1,2,SHE Chao-Wen1,2,ZHANG Ling-Ling1,WU Xian-Jin1,2(1.Department of Bioengineering,Huaihua College,Huihua,Hunan 418008,China;2.Key Laboratory of Huaihua for Breeding and Bioprocess Technology,Huihua,Hunan 418008,China);Orthogonal Optimization of RAPD System for Pepper Varieties in Hunan Province[J];Northern Horticulture;2007-09
8 WANG Wei1,ZHENG Gen-chang1,YAN Guang-zhao1,LIU Peng1,CHEN Bing-yan1,BAO Feng-li2(1.Inner Mongolia University for Nationalities,Tongliao,Inner Mongolia 028043,China;2.Denong Need Co.LTD,Beijing 100101,China);Optimization for RAPD-PCR Reaction System and Amplified Program of Dry Peppers[J];Northern Horticulture;2009-02
9 YAN Guangzhao,ZHENG Genchang,WANG Wei,LIU Peng (College of Agronomy,Inner Mongolia University for Nationalities,Tongliao, Inner Mongolia 028043);Optimization of RAPD Reaction System with Orthogonal Design in Dry Pepper in Inner Mongolia[J];Journal of Changjiang Vegetables;2008-16
10 WANG Wen-jiang~1, ZHANG Gui-xia~2,ZHANG Zhi-hua~1 (1. Mountainous Areas Research Institute of Hebei Province, Agricultural University of Hebei, Baoding 071001, China; 2. Department of Horticulture, Agricultural College of Tianjin, Tianjin 300384, China);Genomic DNA extraction procedure for AFLP analysis in persimmon trees[J];Journal of Agricultural University of Hebei;2004-05
China Proceedings of conference Full-text Database 3 Hits
1 Liang Dong, Ma Fengwang and Xia Hui (College of Horticulture, Northwest Sci-Tech University of Agriculture and Forestry, Yangling Shaanxi 712100, China);Advances in Gene-engineering in Fruit Trees[A];[C];2004
2 ;Prokaryotic expression of polyphenol oxidase mature protein from Camellia sinensis Yihongzao cultivar[A];[C];2009
3 ;Progress of Breeding with Molecular Markers in Cucurbita Squash[A];[C];2012
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