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《Chinese Journal of Animal Science》 2019-01
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Expression Analysis of Immune-related Genes During Pig Skeletal Muscle Development

HU Ming-yang;ZHOU Huan-huan;QI Xiao-long;XU Yue-yuan;ZHAO Shu-hong;ZHAO Yun-xia;LI Xin-yun;Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Ministry of Education, Huazhong Agricultural University;Key Laboratory of Swine Genetics and Breeding, Ministry of Agricalture, Huazhong Agricultural University;  
This study was designed to investigate the expression pattern and potential functions of the immune-related genes at the transcriptional level during the Lantang and Landrace pig skeletal muscle development. In this study, the expression profile of immune-related genes during the Lantang and Landrace pig skeletal muscle development was analyzed according to the published RNA-seq data. The differentially expressed(DE) immune-related genes were identified between the adjacent development time points and breeds. The functional annotation analysis was adopted on DE immune-related genes between breeds. The expression profile analysis showed there were 1129 immune-related genes expressed during the development of Lantang and Landrace pig skeletal muscle. The two most DE immune-related genes between adjacent time points enriched comparisons were 49 day compare to fatal 35 day and postnatal 2 day compare to fetal 91 day, that of breed difference were comparisons between Lantang and Landrace at fetal 45 day and postnatal 180 day. Functional annotation analysis showed that DE immune-related genes between breeds primarily enriched in NIK/NF-kappaB signaling, negative regulation of apoptotic process etc. GO biological processes. This study further provides evidence of that immune-related genes are expressed during the development of pig skeletal muscle. The functional annotation results indicate that the differences in skeletal muscle development between Landrace and Lantang pigs may associate to NF-KB-mediated apoptosis.
【Fund】: 国家自然科学基金地区间国际重大合作项目(CGI AR:31361140365);; 国家生猪产业技术体系(CARS-35)
【CateGory Index】: S828
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